Insertion junction: CLIP2.026189_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026189
Chromosome:chromosome 7
Location:4151326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g342450 SEE3 Putative splicing endonuclease positive effector; (1 of 3) K10706 - senataxin [EC:3.6.4.-] (SETX, ALS4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCCGCCGCCGCCGCCGCGGCTGCCCCTGGAGCTGTCGGCGCCGGCAG
Internal bar code:GTCGGATACTAGTAATACAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1356
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTGTGTGTCATGGC
Suggested primer 2:CGCGCAAGACTGTGTGTATG