Insertion junction: CLIP2.026194_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.026194
Chromosome:chromosome 2
Location:6100226
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119500 (1 of 726) IPR011009 - Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCATCACGGATGAACTTAACTCCATTGAGACGATCTCCCTGGCAATCTC
Internal bar code:ATTCGATGCGGGTTTAGTGATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2028
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GAAACCTAACGCACCTGGGA
Suggested primer 2:ACGACCATGAGCTGAGCAAA