Insertion junction: CLIP2.026215_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026215
Chromosome:chromosome 9
Location:897960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403300 (1 of 1) K03144 - transcription initiation factor TFIIH subunit 4 (TFIIH4, GTF2H4, TFB2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCAACCCATATGGCTTCGTCACGGAGGCGACAATAGCTTCCTCAACCA
Internal bar code:GGGGGTAGGTCTGAGGTAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2615
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTCCTTACAGAGGTGGC
Suggested primer 2:AAGCCCTTATCGCACACACA