Insertion junction: CLIP2.026229_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.026229
Chromosome:chromosome 16
Location:5426484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682700 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGATGCTAATGAGATTGCAGAGACAGCACGCGCCAGAAAAGCCGCTTGC
Internal bar code:GAGACAAGTCTCACCGGCCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:921
LEAP-Seq percent confirming:52.6316
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTTTCTGCTTCGCACTG
Suggested primer 2:GCACACGAATGCAACACAGT