Insertion junction: CLIP2.026237_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026237
Chromosome:chromosome 10
Location:5285835
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801179 (1 of 1) IPR001584//IPR012337//IPR016197 - Integrase, catalytic core // Ribonuclease H-like domain // Chromo domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGAAAGGGGACTTGCCGGTGGAACGGTTCTGCGCATTGTTAATCGCAA
Internal bar code:GCGCTCATATTGCTGGAACATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3819
LEAP-Seq percent confirming:76.1905
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCCTATCCCGGAACTAC
Suggested primer 2:AAGGGTAGCACACGAACAGG