Insertion junction: CLIP2.026258_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026258
Chromosome:chromosome 4
Location:3154182
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g226100 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGCCGCCACACGGCAGTCACATACATTTCCACACACGCTTCACAGCC
Internal bar code:CACGTCAGGGCTGGCGCCTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4498
LEAP-Seq percent confirming:19.5652
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTCTCCCCACCAGTTAC
Suggested primer 2:CCAAAGCCACAAACGTCTGG