Insertion junction: CLIP2.026258_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.026258
Chromosome:chromosome 4
Location:3154184
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g226100 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACTGGAGCACGCGGGCGCGCCTGCCGTCGCCTCAAGCGGCGGCCGAC
Internal bar code:CGTTAGTGCGGTGATAATTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2298
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAAGCCACAAACGTCTGG
Suggested primer 2:GCACTCTCCCCACCAGTTAC