Insertion junction: CLIP2.026262_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026262
Chromosome:chromosome 2
Location:5035292
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111000 RRA1,CGL9 (1 of 3) PTHR10994//PTHR10994:SF3 - RETICULON // ARABINOSYLTRANSFERASE; Reduced residual arabinose 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGCGCTGGAACTTGTCCGGGTGATAGTTGACGTGGATCATGACTGGC
Internal bar code:AGATTCTGGTCGCAGCCATCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2495
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCGGCCTCTTCTCCTGG
Suggested primer 2:GGCGCGCTTGTATGTTAAGG