Insertion junction: CLIP2.026263_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.026263
Chromosome:chromosome 10
Location:363650
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420450 (1 of 2) PTHR18841:SF0 - PROTEIN C08G5.3, ISOFORM A-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTACCCTCCTTCATAGCAACAGCAGCAGCACCCCGCCCGCACCGCACCT
Internal bar code:TGCAGATGTTCAGGTCGTCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:613
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGTGCTGTGCTGTAGTG
Suggested primer 2:TCCACGATCTTCCACTTGCC