Insertion junction: CLIP2.026271_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026271
Chromosome:chromosome 1
Location:6674943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047500 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGTGATGTCGGGGGTCAGGGCCGTGAGCGGGGGGTTGTCAGCCAGG
Internal bar code:CAGTACGCTGAATCGTGACCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1974
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGAAACGACTTCTCCCC
Suggested primer 2:CGGCATGTAACGGAGCATTG