Insertion junction: CLIP2.026272_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026272
Chromosome:chromosome 2
Location:5772239
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116800 (1 of 1) PTHR12381:SF46 - SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACCATGTCACCCGGCAAGCTGCCGGGGCCGGAGGCGTGCGAGGTGATC
Internal bar code:GCGTATACAGCAACCAACGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1215
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGCGTGCAGGCATTAAG
Suggested primer 2:TTGCGTTCCTCCCACTGTAC