Insertion junction: CLIP2.026278_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.026278
Chromosome:chromosome 16
Location:6499311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674750 (1 of 2) PF01857 - Retinoblastoma-associated protein B domain (RB_B) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAACATCTAACAGCGCATATAACAGTCTACCTGCAGGAAGACGTGCAGC
Internal bar code:CGCCGTTAAAACTCGGAGTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2275
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCCGTGTTGGGAAGACAT
Suggested primer 2:ATCACCTGCACTCACCATGG