Insertion junction: CLIP2.026291_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.026291
Chromosome:chromosome 10
Location:3980357
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801165 (1 of 1) IPR000104//IPR001965//IPR009057//IPR011011//IPR013083//IPR019787 - Antifreeze protein, type I // Zinc finger, PHD-type // Homeodomain-like // Zinc finger, FYVE/PHD-type // Zinc finger, RING/FYVE/PHD-type // Zinc finger, PHD-finger intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGAACGTAACCGGTTGTAGTCACGCACACCCATTTTGTCAGCCCGTA
Internal bar code:GTTACTGGCGTATCCTGCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4343
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGCACATGTCAAGAGTCA
Suggested primer 2:CGACGTCAAGCCCGATGATA