Insertion junction: CLIP2.026310_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026310
Chromosome:chromosome 3
Location:5835598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188100 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCTACTGCCCGGGATCCAGGCTGACTGGATCCGGATTCGCCGCGTGG
Internal bar code:CTGAGCGCATTCAGCGCTCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2622
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCACAGGGCTAGTCACAG
Suggested primer 2:CCAAGTGTTGAATTGGGGCG