Insertion junction: CLIP2.026316_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.026316
Chromosome:chromosome 8
Location:3436519
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378300 3'UTR
Cre08.g800944 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATAATACTGCATTTCACAGCAAGGCACGGCCGAAAGGTTTTTGTTTGC
Internal bar code:ACTGTAACGACGGTGTGTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2834
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGGGATGGTGCATGGAC
Suggested primer 2:GCTTGTTGGCTTGCATGTCA