Insertion junction: CLIP2.026316_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026316
Chromosome:chromosome 8
Location:3436520
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378300 3'UTR
Cre08.g800944 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAATGACTCATCGGCCGCATCTCATTGTAGATTGCCTCCCCCACCACCA
Internal bar code:CCTTATAGGTGCCATGCGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1964
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGTTGGCTTGCATGTCA
Suggested primer 2:TGAAGGGATGGTGCATGGAC