Insertion junction: CLIP2.026320_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026320
Chromosome:chromosome 17
Location:4382559
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g730550 (1 of 3) PTHR22298:SF39 - ENDOGLUCANASE 7 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAACCGGGGGACGACAAATACGTCGTCAGCGATGCCAGCAGCATCCTAA
Internal bar code:GACGTACTGAGTCGTGACGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4694
LEAP-Seq percent confirming:94.0476
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCGCCGATAGCTCTTAG
Suggested primer 2:GAGGGTCTTGGCGAACTCAA