Insertion junction: CLIP2.026333_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026333
Chromosome:chromosome 16
Location:5287166
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683953 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCATGCATGCATCCAGGCATGAGGATGACACGCACGCCCTTCAGCTGTC
Internal bar code:GTATTAGACAGGTTGTCATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1527
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAACGACTTAGCACGCCA
Suggested primer 2:CTGACGAAGGCGCAATTAGC