Insertion junction: CLIP2.026337_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026337
Chromosome:chromosome 1
Location:516006
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003100 (1 of 1) IPR001623//IPR011011 - DnaJ domain // Zinc finger, FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGACTTGCGTGTGGGCCCCAGCGCTTGTGCTGCCTAGATGCTGCCGCC
Internal bar code:GTAACAGGAAGACGTAATGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1282
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAATGCTTCGGGTTCAG
Suggested primer 2:AAGCTGCAGAAGTCCAGTCC