Insertion junction: CLIP2.026344_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026344
Chromosome:chromosome 2
Location:935559
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g079300 VPS4 AAA-ATPase of VPS4/SKD1 family; (1 of 1) K12196 - vacuolar protein-sorting-associated protein 4 (VPS4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGATACCGTAGCAGCAACCTCACCAGGACAAAGTGGACGGTCGGGGTG
Internal bar code:TGTGCACGGTTGGGGAGTGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3759
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAGATCACTGCCTCCTT
Suggested primer 2:CGCTTACGCTCTGGACCTAG