Insertion junction: CLIP2.026354_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026354
Chromosome:chromosome 9
Location:5712960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410500 PAP11 (1 of 1) IPR002934//IPR023214 - Polymerase, nucleotidyl transferase domain // HAD-like domain; Class-II RNA nucleotidyl transferase 11 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTTGGATCCGGAGCATCGGGGGCAGCAACAGCATGCAGAGGAAGACGA
Internal bar code:GGCTGACTAGTAACATGGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2915
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTATGTTGAAGCTTCCG
Suggested primer 2:AAGAGCAGGAGGAGGAGGAG