Insertion junction: CLIP2.026360_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.026360
Chromosome:chromosome 13
Location:1193240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569850 AMT4,AMT1D Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCCCCCGCGGTCCAGCATGTGCCAGGCACTGTCGGTGCACAAGATCG
Internal bar code:ATGGATGTTGACCTACGTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5223
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCAGGAAGAGCAGGCACA
Suggested primer 2:GGCTTCGCTTATGGCATTGG