Insertion junction: CLIP2.026373_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.026373
Chromosome:chromosome 12
Location:5866560
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533400 (1 of 1) PTHR13527:SF0 - SAYSVFN DOMAIN-CONTAINING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCTGGCGAGCGCCTCCGTGAGACCCGGCACCACAAGGCCTGACACAA
Internal bar code:TATAGTAAATGATTTCCCAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3028
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTCACACCGTACTGCAC
Suggested primer 2:TCAGGCGTCGGTAAATGCTT