Insertion junction: CLIP2.026386_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026386
Chromosome:chromosome 8
Location:1389725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g364151 CDS
lncRNA_TCONS_00154037 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATTGTCCTGGCGCCGCCGCCTTTTGAGGACTACGCGCCGCCGCCACAG
Internal bar code:TAACGCGTCTGAATTCGCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1001
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGGTGCTTGACGGAAC
Suggested primer 2:CCCTTTTCCCGTGATCACCA