Insertion junction: CLIP2.026392_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026392
Chromosome:chromosome 3
Location:7325278
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206800 HXT1 (1 of 1) PTHR23500//PTHR23500:SF118 - FAMILY NOT NAMED // PLASTIDIC GLUCOSE TRANSPORTER 4; Plastidic glucose transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTTCTTGGTGGGCAATCATTCATTTTGGGATCGGAATGAACTACCCC
Internal bar code:GAGGGGCCTTTATCCTAAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:480
LEAP-Seq percent confirming:38.8889
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TATTCAGCCGTGTCGTGTCC
Suggested primer 2:CGATTTGTGTGCGTGTGTGT