Insertion junction: CLIP2.026408_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.026408
Chromosome:chromosome 10
Location:3923774
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446650 HEL46,MER (1 of 1) K15271 - ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12] (HFM1, MER3); conserved protein with DEAD/DEAH box helicase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCGGCGCTGAAGCCTCCGCAGCTTAGGAGTGAGGGCCAGAGTTGCTG
Internal bar code:ATGATAGCTATTGTAATCACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2019
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTGCTTCGGTAAGTGGT
Suggested primer 2:TCCTAGATGCCTGGAGCTGT