Insertion junction: CLIP2.026417_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026417
Chromosome:chromosome 3
Location:5541050
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185150 (1 of 11) IPR023109 - Integrase/recombinase, N-terminal CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGTGGACCCCACCTACCTCAACACAGCGGTCTACCGCACCGTGCCGG
Internal bar code:TAGAGCTGCAGCGTGCTGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2307
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCAGCAGCGTCTGGTAA
Suggested primer 2:CACTGCCATCGCTAGAGGAG