Insertion junction: CLIP2.026417_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026417
Chromosome:chromosome 3
Location:5541053
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185150 (1 of 11) IPR023109 - Integrase/recombinase, N-terminal CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGAAGTGTCATGCCGCTCCCGAGGTTTGGGCTTTGGGGGCGGCGGCGG
Internal bar code:TAGAGCTGCAGCGTGCTGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3731
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGCCATCGCTAGAGGAG
Suggested primer 2:CCTTCAGCAGCGTCTGGTAA