Insertion junction: CLIP2.026447_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026447
Chromosome:chromosome 13
Location:2832652
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g582900 (1 of 77) IPR001623 - DnaJ domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCACGCGGTGGCAGAGGTGGTCATGCAGAGGTCAAGGGCAGGTGTGG
Internal bar code:TATGTAACCTGTGACTCGAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4884
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GACCTGAGGCAACAGTCGAA
Suggested primer 2:TGCATCGCATCCACTGTCTT