Insertion junction: CLIP2.026452_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026452
Chromosome:chromosome 10
Location:3168481
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441800 (1 of 4) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCCGCGCCTCACGGTCCTGGCGCAACGCGGGCAGCGACGCCGAAGAT
Internal bar code:GTTGGGAATTTAACGGACCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:316
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CATCTCTCCCGCCATTCTCC
Suggested primer 2:CTTGCCGTTGAGATGGGTCT