Insertion junction: CLIP2.026460_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026460
Chromosome:chromosome 3
Location:5648690
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186300 DII2,FAP146,p38 p38 protein Associated with Inner Arm Dynein d; (1 of 26) IPR011990 - Tetratricopeptide-like helical domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGAGGAGGGCAGGAAAGAGGGCAATGGACCGATGTGCCCGGTTGCAG
Internal bar code:CGGTAGTCGATCCTCCCTGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:656
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGGCTGGACCATATTCTC
Suggested primer 2:GAGCTATTCCAGGAGTCGCC