Insertion junction: CLIP2.026475_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026475
Chromosome:chromosome 1
Location:721387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004000 (1 of 1) PF08855 - Domain of unknown function (DUF1825) (DUF1825) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCCCCAGGCTCAAGCAGAGTGTCGCCGAGTACCGCAAGTGAGTTGCC
Internal bar code:GTCTTGTTAGACATTAGGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1125
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGTACCTACGTTCCGAG
Suggested primer 2:GCTCTGGGTCATGGGAAACA