Insertion junction: CLIP2.026483_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026483
Chromosome:chromosome 7
Location:163753
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313206 (1 of 2) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCATGTGCGTGTATGCATGAGTGTCTGCCTGCTGGTTCACCAGCACGCG
Internal bar code:ATTTACGATGCATTTTCTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1201
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCTGGACAGTTCCTGAC
Suggested primer 2:GGGTGGAGGGGGTTAAATGG