Insertion junction: CLIP2.026486_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026486
Chromosome:chromosome 1
Location:4025442
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026500 ASP3 (1 of 2) 3.4.23.12 - Nepenthesin / Nepenthes aspartic proteinase; Pepsin-type aspartyl protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGGACGAGGTGGGATTGTGTGTAGTAGGATAGGGCGGGGGGCGGTGT
Internal bar code:TTATTTTTACAAGTCTAAAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2300
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCCTCCACTGCGGAAAT
Suggested primer 2:CAAGACTTGTGGGCCTTTGC