Insertion junction: CLIP2.026488_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026488
Chromosome:chromosome 3
Location:6019643
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189700 (1 of 2) K07735 - putative transcriptional regulator (algH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCCCGGTGGAAGTAGGTCTGGGAGTTTTGGAACAGGAGCGGATGGGC
Internal bar code:CGAGAACACCAATCGGGGTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:4196
LEAP-Seq percent confirming:93.9189
LEAP-Seq n confirming:139
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:148

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCAGGGTAGGCAATTGGC
Suggested primer 2:CGTCAACGCACAAGAAAGCA