Insertion junction: CLIP2.026492_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026492
Chromosome:chromosome 4
Location:1866173
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218050 RWP8 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGATTGGGCCGGGCTCCTGGCAGTCGCAGCCTTCGCACGACGCCCCCCT
Internal bar code:AAACAGAGGACCCGTGAAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1546
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGTTTTCGCTACGCAGC
Suggested primer 2:ACTCAGGTTGCAATCTCCGG