Insertion junction: CLIP2.026509_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026509
Chromosome:chromosome 6
Location:3968452
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278204 (1 of 4) PTHR10334//PTHR10334:SF224 - CYSTEINE-RICH SECRETORY PROTEIN-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCATCCTGAACCGGCGGTTCACCGTTCGTGATGTGAGTTGTGCGAGC
Internal bar code:AACAGTTTATGGTACGCTGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1862
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ATTACGGGCTTCGCGAGTAG
Suggested primer 2:GCATCGCCGTTTCTTCCATC