Insertion junction: CLIP2.026536_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026536
Chromosome:chromosome 14
Location:2966010
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627500 (1 of 1) PTHR18937//PTHR18937:SF259 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAACAGCAGCACATTGCAAACCTGGCAGCAAACCCACACGGCAGTCCC
Internal bar code:ACCTGGCGGGTGGCCGACTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:495
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCTGGTTTGTGTGTCGC
Suggested primer 2:TCATGATTGTGGGTGCGACA