Insertion junction: CLIP2.026536_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026536
Chromosome:chromosome 14
Location:2966011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627500 (1 of 1) PTHR18937//PTHR18937:SF259 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAATAGCTGTGACCAGAATTTGTAATAAGGGCTTGTTACTGTTGACAG
Internal bar code:ACCTGGCGGGTGGCCGACTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:931
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGATTGTGGGTGCGACA
Suggested primer 2:GTGTCTGGTTTGTGTGTCGC