Insertion junction: CLIP2.026540_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026540
Chromosome:chromosome 7
Location:1475133
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g324000 NUP160 Nucleoporin 160; (1 of 54) IPR011047 - Quinonprotein alcohol dehydrogenase-like superfamily intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACATGGGCCATGGTGGCCAGACTCCCGCGTGCACTTTGCCTCCCTCC
Internal bar code:TAGTTAAGGATGAATATTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:293
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGACATCTGACGCATGC
Suggested primer 2:CCACCGACCTCTTCACAGAC