Insertion junction: CLIP2.026544_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026544
Chromosome:chromosome 7
Location:913688
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318950 (1 of 1) IPR000008//IPR000104//IPR003072 - C2 domain // Antifreeze protein, type I // Orphan nuclear receptor, NOR1 type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCAAGGTGGGGCCTGGGGCCCAGGGGCGGTGACCTGCTGGCAGACTGG
Internal bar code:GCGACCAATTTATCAGACGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3055
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCGATGATGCCGTGCAG
Suggested primer 2:CACACTGCGACCCACAATTG