Insertion junction: CLIP2.026545_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026545
Chromosome:chromosome 3
Location:6439851
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193150 (1 of 1) PTHR13507//PTHR13507:SF0 - UNCHARACTERIZED // PRKR-INTERACTING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGAAAGAGACCACATGTCCCAATCTTACAGAAGCTGCGATGCCTTTC
Internal bar code:GTTTCGGGGTCACGTGTTCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2210
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCGACTTCCACCAATACC
Suggested primer 2:CCACACAATATGCATGGGCG