Insertion junction: CLIP2.026549_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026549
Chromosome:chromosome 13
Location:3549189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g587800 NUP188 (1 of 1) PTHR31431:SF1 - NUCLEOPORIN NUP188 HOMOLOG; Nucleoporin 188 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGAGAAGGAGGTGAGGAGAAGGAGGTGGGTATTGTGAACTGTGAAATT
Internal bar code:TGGCAGTCTGTCAGGACACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1996
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGTGGTGCTACACGAC
Suggested primer 2:GCATACACGGCTCTCCTCTC