Insertion junction: CLIP2.026549_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026549
Chromosome:chromosome 13
Location:3549205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g587800 NUP188 (1 of 1) PTHR31431:SF1 - NUCLEOPORIN NUP188 HOMOLOG; Nucleoporin 188 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTGTCCGACCTGGGCGACACGCTGGCGCTGCTGGCGGAACTGACGG
Internal bar code:TGGCAGTCTGTCAGGACACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1187
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCATACACGGCTCTCCTCTC
Suggested primer 2:CCTGGTGGTGCTACACGAC