Insertion junction: CLIP2.026564_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026564
Chromosome:chromosome 1
Location:3724120
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024251 (1 of 1) PF00270//PF00271//PF04408 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Helicase associated domain (HA2) (HA2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCCGTATGATAGGCCACGGCGCATTTGCTTACCGGCGCCATAGCTGC
Internal bar code:ACGTATACGTATGGCGGTCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1150
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACGCGTTCATTCGTCAC
Suggested primer 2:GCGGAACCCACATTGTAGGA