Insertion junction: CLIP2.026566_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.026566
Chromosome:chromosome 5
Location:1522946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234660 (1 of 4) IPR011016//IPR013083 - Zinc finger, RING-CH-type // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTCAATGCTGGTTCCGGCCTTACGCAGCACCTCGCGCAGCACACAGCC
Internal bar code:CATTGTCGCTTTGAGAATACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2918
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGGCGGGAATCTGAGCA
Suggested primer 2:GGATCAATGCCAAATCCCGC