Insertion junction: CLIP2.026569_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026569
Chromosome:chromosome 1
Location:3611260
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023550 FAP234,TPG2 Flagellar Associated Protein 234; (1 of 1) PTHR24365//PTHR24365:SF301 - TOLL-LIKE RECEPTOR // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTCTTGTGCTTGTTAACACACGTACCAAATGCTCCTTCCTGCAACAC
Internal bar code:AACTCGGCTCACGGAACTTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:658
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTCACAGTGGGAGGAAG
Suggested primer 2:TCATTGGAGCGGATGCACAT