Insertion junction: CLIP2.026593_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026593
Chromosome:chromosome 3
Location:5540936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185150 (1 of 11) IPR023109 - Integrase/recombinase, N-terminal CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCGCCAGCACTGCGGGACGTTGCGCTAGTGCCCGCCCGCTGGTTGAT
Internal bar code:AAGCGTACGTTGAACCCGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3615
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGGGCACGTATGTAGAT
Suggested primer 2:TCCGTACAGCTGCGAACAAT