Insertion junction: CLIP2.026601_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.026601
Chromosome:chromosome 13
Location:216663
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g563500 (1 of 8) IPR011047//IPR018391 - Quinonprotein alcohol dehydrogenase-like superfamily // Pyrrolo-quinoline quinone beta-propeller repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGCCTACAGTGGGGCGCGGAAGCTTGAGCGTATGGGCAGACGGGGC
Internal bar code:GTTTTCGTTGGCGTCACAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:265
LEAP-Seq percent confirming:26.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCACGTGTTTGTAAGTGT
Suggested primer 2:AGCGGTTTCCTGAATGTCGT