Insertion junction: CLIP2.026617_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026617
Chromosome:chromosome 6
Location:8049568
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305050 EEP5,CGL45 expressed protein Conserved in the Green Lineage; (1 of 90) PF03372 - Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTATAATCAAATTCCACAGAAGAAGTTACTCGAACACCAGCCTCGCG
Internal bar code:CCGCTGAAGGCGCAGAGATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1296
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATGGTGGAGCGAGAGTG
Suggested primer 2:TGTCAAAGCCAACATGCACG